Petr Marsalek, Supervising and Reviewing Students Works

Student names, academic titles, nationalities (abbreviated natl./ more than 10 countries), year, notes; ordering Last In Last Out. Some names are counted more than once. Some students earned more than one degree under my supervision. Some errors persist in this file...
Numbering is according the categories and then in ascending chronological order mostly arbitrary; numbered are people, of whom I did not lose track immediately; who pursued academic career for some time; et cetera...
Fonts used: colleagues with more than one qualification with me are set in green, deceased colleagues are set in blue and my planned but not realized actions are shown in stroked through font.
At the end of some numbered items it reads, what year it happened. It is the best dating of events, what I am capable of (?)... This text is never up to date. It was last touched (circa) in February 22, 2022.

Theses in Submissions and Review
As of academic year 2021/ 2022: none yet

Successful Defenses of My Graduate Students

1. ing. Jaroslav Bouše, PhD., natl. CZ, 2021.
   (subject branch: acoustics, CTU)
2. mgr. Peter G. Tóth, PhD., natl. SK, 2020.
   (subject branch: biomedical informatics, CUNI)
3. mgr. Július Štroffek, PhD., natl. SK, 2018.
   (subject branch: biomedical informatics, CUNI)
4. ing. Dominik Štorek, PhD., natl. CZ, 2017.
   (subject branch: acoustics, CTU)
5. ing. et ing. Marek Drápal, PhD., natl. CZ, 2011.
   (subject branch: medical biophysics, CUNI)

Current Graduate Students

6. Martin Vancura, MSc., CZ, MFF UK graduate, CTU,
   currently at First Medical Faculty (MF1) Charles University in Prague (CUNI),
   to graduate as MD circa in 2024.

Current Undergraduate Students
(*) František Mestek.
(*) Tereza (Vasinova) Morackova.

Current Collaborations/ Coauthoships

7. ing. František Rund, PhD
   Department od Radio Engineering, FEE CTU

prof. Martin Vokurka, MD, PhD
Institute of Pathological Physiology, MF1 CUNI

Reviewing PhD Dissertations
All theses below have been accepted and successfully defended.
Currently (beginning of year 2022) I reviewed 20 of them.
(*Planned) ing. Jakub Kral
Department of Natural Sciences (DNS) FBMI CTU
(*Planned) ing. Martin Fůs, DNS FBMI CTU
Adéla Plechatá, Mgr., natl. CZ,
(advisor Iveta Fajnerova
at the National Institute of Mental Health, natl. CZ)
8. Matúš Tomko, Mgr., natl. SK, 2021.
   (advisor Lubica Benuskova
   at the Comenius University, natl. SK)
9. Lukáš Hejtmánek, mgr., PhD., natl. CZ, 2020.
   (advisor Kamil Vlček
   at the Charles University, CUNI, neurosciences, Third Med. Faculty)
10. Jan Šilar, ing., PhD., natl. CZ, 2019.
    (advisor Jiří Kofránek
    at the Charles University, CUNI)
11. Filip Ježek, ing., PhD., CTU, 2019.
    (advisor Jiří Kofránek
    at the Czech Technical University, CTU)
12. Kateryna Pysanenko, mgr., PhD., natl. UA, 2018,
    (advisor Josef Syka
    CUNI, neurosciences).
13. Daniel Šmít, mgr., PhD., natl. CZ, 2017,
    (advisor Martin Zápotocký
    CUNI neurosciences).
14. Soma Chakraborty, mgr., PhD., natl. IN, CUNI, 2017,
    (advisor Martin Zápotocký).
15. Jakub Schlenker, ing., PhD., natl. CZ, FBMI CTU, 2017.
    (FBMI = Faculty of the BioMedical engIneering,
    PM ? committee member/ ? opponent)
16. Tomáš Nedělka, MD., PhD., natl. CZ, FBMI CTU, 2017.
    (PM ? committee member/ ? opponent)
17. Petr Hošek, ing., PhD., natl. CZ, 2016,
    (FBMI CTU CZ, Topic: Cyto-kines and Fyto-hormones, advisor?).
18. Tetyana Chumak, MD., PhD., natl. UA, 2016.
    (advisor Josef Syka)
19. Václav Vencovský ing., PhD., natl. CZ, FEE CTU, 2015,
    (advisor Zdeněk Otčenášek).
(*) Jakub Ráfl, ing., PhD., natl. CZ, FBMI CTU, 2015.
(advisor Karel Roubík; PM ? committee member/ ? opponent)

20. Roman Fraško, MD., PhD., natl. SK, CUNI, 2014,
    (advisor Pavel Maruna?)
21. Jolana Bartošová (née Grécová), mgr., PhD., CUNI 2012,
    (advisor Josef Syka?)
22. Vasco Medici, dipl.ing, PhD., natl. CH, ETH Zürich CH, 2010,
    (advisor Steven Fry).
23. Jan Bartussek, dipl.ing, PhD., natl. DE, ETH Zürich CH, 2010,
    (advisor Steven Fry).
24. Ondřej Pokora, mgr., PhD., MUNI, 2009,
    (advisor Petr Lansky
    at the Masaryk University Brno, MUNI.)
25. Martin Vondrášek, ing., PhD., FEE CTU, 2008,
    (advisor ?)
26. Lubomír Košťál, mgr., PhD., CUNI, 2007,
    (advisor Petr Lansky)
27. Zbyněk Bureš, ing., PhD., natl. CZ, FEE CTU, 2007,
    (advisor František Kadlec)

Currently on Study Vacation

28. Marek Hajný, MD., natl. CZ, started circa 2015 - 2016.
29. Elizabeth Kozáková (née Denysyuk), DiS., MD., natl. UA, 2018 - 2019.

(*) Dhara Bhavsar, MSc., Dipl.ing., natl. IN, graduate from DE,
maternity leave.

Other Students/ Alumni/ Seminar members

30. Victoria Serdenko, BS., natl. UA, currently at MF1 CUNI Prague.
31. Karin Leščinska, BS., natl. SK, currently at MF1 CUni Prague.
32. Yonatan Alster, BS., natl. IL, currently at MF1 CUni Prague.
33. Saniya Dyussekenova, MSc., natl. KZ, CTU graduate, currently at Kazakhstan.
34. Ekaterina Koshkina MSc., natl. UA?, CTU graduate, currently at Continental Corporation.
35. Craig Edwin Smith MD, natl. USA, MF1 graduate.
36. Roman Svoboda, BS., natl. CZ, undergraduate, currently at ETH Zurich.
37. Denisa Svobodová, natl. CZ, to graduate as MD in 2021 - 2022,
    at the MF1 CUni Prague.
38. Lucie Svobodová, MD., natl. CZ in 2019 in Prague.

Committee Member PhD Defenses
(*) Jakub Zajíc, ing., PhD., natl. CZ, FBMI CTU, 2021.
(FBMI = Faculty of the BioMedical engIneering,
PM committee chair)
Doctoral exam, Lucie Mrazkova, ing., natl. CZ, 2021,
(PM committee member.)

39. doc. Petr Kudrna ing., PhD., natl. CZ,
    (FBMI CTU, Topic: High Frequency Ventilation, 2016).
40. Jan Mikšovský, ing., PhD., natl. CZ, 2016,
    (PM committee member.)
(*) Libor Černý MD., PhD.,
(subject branch: gerontology, LC was the last graduate;
the program deceased to exist shortly afterwards,
advisors Olga Dlouha, Jan Vokral, CUNI.
PM was only curious academic public crowd attendee.)
41. Ivana Kubátová (née Juřičková), ing., 2015.
    (PM ? committee member/ ? opponent, FBMI CTU.)
42. Michael Kana, dipl.ing, PhD., natl. CM, FBMI CTU, 2010.
    (PM ? committee member/ ? opponent,
    this was the very first graduate at the FBMI.)

Collaborations
43. Diana Tóthová (née Kuchárová), MD., 2015 - 2020,
    (advisors Josef Syka, Oliver Profant).
44. ? Veronika Svobodová, MD.,
    (advisors Josef Syka, Oliver Profant).
45. ing. Lubomír Hládek, PhD., natl. SK, 2015 (advisor Norbert Kopčo).
46. Pavel Šanda, mgr., PhD., natl. CZ, 2012.
47. Ondřej Pokora, mgr., PhD., natl. CZ, MUNI, 2017.
48. Jana Kopecká, nee Kališová, Bc., MD., natl. CZ, (2007-2010).
49. Tomáš Hromádka, mgr., MD., PhD., natl. SK, (CSHL, New York, NY), 2007.
50. Eduard Kuriščák, MD., PhD., natl. SK, (2003/ up to present time).
    (J. Hlávka award.)
51. Fidel Santamaría (Perez), natl. MX, and US, (1996 - 1997).

Reviewing Diploma Theses

52. Bc. Tomáš Novák, 2021 (advisor Martin Rožánek).
53. Bc. Barbora Chmelová, 2020 (advisor Martin Rožánek).
54. Klaudie Černovská, 2019 (advisor Roman Matějka).
55. Dominika Sedlačková, 2019 (advisor Roman Matějka).
56. Martin Beneš, 2016 (? advisor).
57. Rasim Muftiev, natl. RU, 2016 (advisor Roman Matějka).
58. Gabriela Malá, 2015 (advisor Vladimír Rogalewicz).
59. Petr Pěnkal, 2015 (advisor Václav Petrák).
60. Pavel Strnad, 2015 (advisor Jiří Lindovský).
61. Vít Vršník, 2015 (advisor Daniel Šuta).
62. Jakub Címus, 2014 (advisor Jiří Lindovský).
63. Ladislav Bartoň, 2013 (advisor Zbyněk Bureš).
    (PM reviewed bachelor thesis.)
64. Gabriela Šejnová, mgr., natl. CZ, ? 2010 (advisor Martin Zápotocký).
65. Markéta Popelová (now Tomková), now PhD, 2010?,
    (advisor Cyril Brom).
66. Ewelina Bartoszek, natl. PL, (advisor ?, Topic: Danio rerio), year? 2014.
67. Michal Trzos, ing., 2009 (advisor Jiří Schimmel).
68. Tomáš Hromádka, mgr., 2006 (advisor Věra Kůrková).
69. Martin(?) Hájek, ing., 1998 (advisor ing. František Duben).

Supervising Diploma theses

70. ing. Eva Syrovátková (), 2013
    (FBMI CTU, advisor Juraj Borovský, P.M. co-advisor);
71. mgr. Peter G. Tóth, 2011, (FMPh aka MFF CUNI).
72. mgr. Radek Slanička, natl. CZ, 2010, (MF1 CUNI).
73. ing. Vladimíra Řezáčová, (now Petráková, née Beránková, now PhD., associated professor, natl. CZ, 2009.
    Topic: Drosophila melanogaster, CTU FBMI dean award, J. Hlávka award.)
74. ing. Markéta Koplová (née Zezulová, now PhD/ 2017), 2014.
    (FBMI CTU and MF3 CUNI, co-advisor Klára Bernášková, MD., PhD.)
75. mgr. Jakub Krchák, 2007, (MFF CUNI).
76. ing. Marek Drápal, now PhD., 2006.
    (CTU Faculty of Electrical Engineering, FEE, dean award.)
77. mgr. Július Štroffek, now PhD., 2004, (MFF CUNI).
78. mgr. Viliam Sabol, 2005
    (MFF CUNI, advisor David Obdržálek, P.M. co-advisor).
79. ing. Martin Vondrášek, 2003, (FEE CTU).

Committee Member, Masters Degree Defenses
80. Jaroslav Bouše, 2013 (or P.M. committee member?,
    advisor ? doc. František Kadlec, ? prof. Jan Sýkora).

Current and Past Undergaduate (Bachelors and Masters) Students
81. Pavel Obdržálek, 2016 - 2017.
82. Tomáš Malina, (? 2015).
83. František Mestek, 2020 - .
84. Iva Krulová née Latnerová, MD

Finished, P. M. as Co-advisor/ Advisor Specialist/ And Similar

85. mgr. Aleš Kuběna, now PhD. (1999 - 2001)
86. Tomáš Grunda, now MD., (2010 - 2013).
87. Vít Štěpánek, ing., (? 2007 - 2009).
88. Adam Žižka, ing., (? 2007 - 2010).
89. (*) Zuzana Dukátová, Bc.at FBMI, now MD, (? 2009 - 2011).
90. Tomáš Hrubý, MD., (2001 - 2003).

Professor/ Docent Committees/ Reviews/ Scientific Committees

91. (planned) Jan Mikšovský, ing., PhD., natl. CZ.
92. (planned) Petr Pisarik, ing., PhD., FBMI CTU CZ.
93. doc. Petr Kudrna, ing., PhD., FBMI CTU CZ.
doc. Jan Bruthans, MD, PhD., (P.M. scientific board member.)

94. doc. Vladimira Petrakova, PhD., (P.M. scientific board member.)
95. doc. David Hoksza, RNDr., PhD., MFF CUNI, accepted.
96. doc. Daniel Šuta, PhD., 2017, MF3 CUNI, accepted.
97. prof. Marek Penhaker, ing., PhD., 2016, FBMI CTU.
    P.M. committee member.
    M.P. doc. 2016 prof. in 2019, FBMI CTU.
98. doc. Jan Lešták, MD, PhD, 2015, FBMI CTU, accepted.
    (P.M. FBMI scientific board member; CTU board rejected this.)
99. doc. Jiří Schimmel, ing., PhD., 2016, VUTBr
    (Brno Technical University), accepted.
100. doc. Norbert Kopčo, ing., PhD., 2009, MF1 CUNI, accepted.
101. doc. Petr Lánský, RNDr., DrSc., 2005, MUNI, accepted.

Other Committees/ Activities
(Internal) Grant Agency of the Charles University in Prague
Reviewer
Group Leader
Member of Board

Own qualification works

• Petr Marsalek, tenured professor, 2014
(mentor: Josef Syka);
(field: biomedical informatics, school: MF1 CUNI).

• Petr Marsalek, associate/ docent, 2005
(mentor: Martin Šámal);
(field: medical biophysics, school: MF1 CUNI).

• Petr Marsalek, PhD., 1999
(advisor: Petr Lánský)
(field: theoretical biophysics, school: MFF CUNI).
(defense opponents: Vladislav Čápek, Zdeněk Wünsch;
defense committee:
Otakar Jelínek, Vladislav Čápek, Miloš Lokajíček, Jaromír Plášek;
doctoral exam committee:
Jan Bureš, Vladislav Čápek, Petr Lánský, Jan Obdržálek, Jaromír Plášek;

• Petr Marsalek, Bc., RNDr., 1994-1999
(mentors: Aleš Drápal, Tomáš Kepka).
(field: general mathematics, school: MFF CUNI).

• Petr Maršálek, MD., natl. CZ, 1984-1990
(mentors: Jiří Kofránek, Josef Syka).
(field: general medicine, school: MF1 CUNI).

For More Information See
Karlin web server/ main web page https://www2.karlin.mff.cuni.cz/~marsalek
DEC52 web server/ main web page https://dec52.lf1.cuni.cz/~pmar
Disconnected: Nemo web server/ main web page http://nemo.lf1.cuni.cz/mlab/marsalek
Onyx web server web page http://patf-onyx.lf1.cuni.cz/mlab/
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