Petr Marsalek, selected publications, most recent on top

In the bold type are shown circa > 35+ papers listed in the Web of Science, W.o.S., (TM) database and/ or have assigned the impact factor (IF). Circa 25+ papers are in Public domain/ also known as Open access.
I can not make sure that all the links and IDs below are kept up-to-date:
(Google Scholar ID): vCSk5pMAAAAJ; (Open Researcher/Contributor =ORC ID): 0000-0002-4035-2620;
(WoS/ Researcher ID): C-1782-2013; (Scopus Author ID): 56624730800;
(Google Scholar) link: (URL): https://scholar.google.cz/citations?user=Petr+Marsalek. It is virtually maintenance free.
(Google Scholar) lists circa 1111 +-15 citations, h-index 16 and some > 55+ of texts, books, extended abstracts, etc.
(Web of Science) keywords: Marsalek Petr, AUTHOR: (Marsalek P) AND ADDRESS: (Prague OR Pasadena).
(Web of Science) lists circa 35+ regular papers, with 400+- citations (320+- without self-citing) and h-index 10. (URL): https://dec52.lf1.cuni.cz/~pmar/pubs_e.htm is one of several web link locations of this document.
I update some of these bibliographic mirrors manually time by time at least once a year, but not more than four times a year. This publication web page is the most fresh. Most of the records a year before the current year should be OK.
Document version is 55.1, of Friday March 28 2025.
Reloaded local date and time: .
  1. Note: Next paper is under preparation, this line is a token to get the HTML numbering right.

  2. GROBORZ O., MARSALEK P., SEFC L., New insights into the mechanism and prevention of central nervous system oxygen toxicity: A prospective review. Life Sci., vol. 360, item 123169, 11 pages, 2025.
    DOI: https://doi.org/10.1016/j.lfs.2024.123169
    Notes: Epub 2024 Oct 22. IF/ Open access item no. 26.

  1. NECAS E. et al., Pathological physiology of organs and systems, parts I and II. Next edition, Karolinum Press, Prague, in preparation. Note: this is in a Czech language, a lightly revised edition of the textbook. Under revision to be out between 2024 and 2025+.

  2. BURES Z., MARSALEK P., Discrimination of sound intensity at low frequencies: models and psychophysics.
    Notes: in preparation, currently under revision, 2024+. Next report item.

  3. MARSALEK P., Et Alia, Traveling wave in cochlea, cochlear time disparities and their role in minimal mechanical model sound encoding in the auditory periphery.
    Notes: in preparation, to be sent to arXiv first, currently under revision, 2024+..., Next report item.

  4. CHANG T.R. (TSAI-RONG), MARSALEK P. (PETR), CHIU T.W. (TZAI-WEN), Strong energy component is more important than spectral selectivity in modeling responses of midbrain auditory neurons to wide-band environmental sounds. Biosystems, vol. 221, no. 104752, 12 pages, 2022.
    DOI: https://doi.org/10.1016/j.biosystems.2022.104752
    Notes: Impacted/ open access item no. 25.

  5. MARSALEK P., SANDA P., BURES Z., On the precision...
    The same manuscript as below is recently under revision to be re-submitted to a refereed journal... 2024+.

  1. NECAS E. et al., General pathological physiology 2nd edition, Karolinum Press, Prague, 2021.
    Note: this is in a Czech language, a lightly revised edition of the textbook item no. 7, this item 48.

  2. BOUSE J., VENCOVSKÝ V., RUND F., MARSALEK P., Functional rate-code models of the auditory brainstem for predicting lateralization and discrimination data of human binaural perception. J. Acoust. Soc. Am., 145, (1), 1-15, 2019.
    DOI: https://doi.org/10.1121/1.5084264
    Note: This is IF item no. 23.

  3. TOTH P. G., MARSALEK P., POKORA O., Ergodicity and parameter estimates in auditory neural circuits. Biol. Cybern., 112(1-2), 41-55, 2018.
    DOI: https://doi.org/10.1007/s00422-017-0739-5.
    Note: This is an open access/ IF no. 22.

  4. MARSALEK P., HAJNY M., VOKURKA M., Pathological physiology of visual pathway. Chapter in: Homonymous visual defects, edited by: Karolina Skorkovska. Springer International Publishing AG, Cham, Switzerland, pages 17-29, 2017.
    DOI: https://doi.org/10.1007/978-3-319-52284-5_2
    Note: This is a refereed chapter in a book, open access item no. 21.

  1. STOREK D., RUND F., MARSALEK P., Subjective evaluation of three headphone-based virtual sound source positioning methods including differential head-related transfer function. Arch. Acoust. 41(3), 437-447, 2016.
    DOI: https://doi.org/10.1515/aoa-2016-0043.
    This is an open access no. 20, IF no. 21.

  2. STOREK D., BOUSE J., RUND F., MARSALEK P., Artifact reduction in positioning algorithm using differential HRTF. J. Audio Eng. Soc. 64(4), 208-217, 2016.
    DOI: https://doi.org/10.17743/jaes.2016.0001.
    Note: HRTF is the Head Related Transfer Function. This is an open access no. N 19, IF no. N+1 20.

  3. TOTH P. G., MARSALEK P., Analytical description of coincidence detection synaptic mechanisms in the auditory pathway. Biosystems, 136, 90-98, 2015.
    DOI: https://doi.org/10.1016/j.biosystems.2015.07.006.
    Note: This is an open access no. 18, IF no. 19.

  4. KURISCAK E., MARSALEK P., STROFFEK J., TOTH P. G., Biological context of Hebb learning in artificial neural networks, a review. Neurocomputing, 152, 27-35, 2015.
    DOI: https://doi.org/10.1016/j.neucom.2014.11.022
    Note: This is an open access no. 17, IF no. 18.

  5. MARUNA P., VOKURKA M., MARSALEK P., Examination tests from pathological physiology/ Zkušební testy z patologické fyziologie. (Several chapters.) [Simultaneously published in both Czech and English language.] [Released both in paper prints and as two pdf e-books.] (Equal contributions by all co-authors, circa 66 of total 200 pages, 33% by Marsalek.) Karolinum Press, Prague, 2015.
    Charles University of Prague Library record permanent link:
    https:// knihovna.lf2.cuni.cz/review/examination-tests-from-pathological-physiology-2
  1. VOKURKA M. et al. Pathological physiology for non-medical curriculum. Fifth edition 2019, fourth edition 2014, third (first e-book) edition 2013, second edition 2008, first edition 2005. [In Czech language.] (The date 2014 marks the full professorship/ tenure. Contribution by Marsalek 20%, two chapters, circa 20 of total 100 pages.) Several printings, recent both in paper prints and as a pdf e-book. For the first edition in 2005, see ITEM I15 on this page. Karolinum Press, Prague, 2014.

  2. BURES Z., MARSALEK P., On the precision of neural computation with interaural level differences in the lateral superior olive. Brain Res., 1536, 16-26, 2013.
    DOI: https://doi.org/10.1016/j.brainres.2013.05.008
    Note: This is an open access no. 16, IF no. 17.

  3. MARSALEK P., BURES Z., Microsecond precision of interaural time differences processing in the medial superior olive studied by a computational model. Conference abstract, proceedings. BMC Neuroscience./ DOI..., 2013.

  4. GRUNDA T., MARSALEK P., SYKOROVA P., Homonymous hemianopia and related visual defects: restoration of vision after a stroke. Acta Neurobiol. Exp. (Wars.), 73(2), 237-249, 2013.
    DOI: https://doi.org/10.55782/ane-2013-1933
    Note: Open access 15, IF no. 16.

  5. STROFFEK J., MARSALEK P., Short term potentiation effect on pattern recall in sparsely coded neural network, Neurocomputing, 77, 108-113, 2012.
    DOI: https://doi.org/10.1016/j.neucom.2011.08.021
    Note: This is an open access no. 14, IF no. 15.

  6. SANDA P., MARSALEK, P., Stochastic interpolation model of the medial superior olive neural circuit, Brain Res., 1434, 257-265, 2012.
    DOI: https://doi.org/10.1016/j.brainres.2011.08.048
    Note: This is an open access no. 13, IF no. 14

  7. KURISCAK E., MARSALEK P., STROFFEK J., WUNSCH Z., The effect of neural noise on spike time precision in a detailed CA3 neuron model, Comput. Math. Meth. in Medicine, 595398, 16 pages, 2012.
    DOI: https://doi.org/10.1155/2012/595398
    Note: This is an open access no. 12, IF no. 13

  8. MARSALEK P., Spike timing jitter is beneficial in neural spike coding - a case of the mammalian MSO sound localization circuit. Conference abstract, BMC Neuroscience. 2011.

  9. DRAPAL M., MARSALEK P., Stochastic model explains role of excitation and inhibition in binaural sound localization in mammals. Physiol. Res., 60 (3), 573-583, 2011.
    PDF: https://www.biomed.cas.cz/physiolres/pdf/60/60_573.pdf
    Note: (To do: add doi.) Open access 11. IF no. 12

  10. DRAPAL M., MARSALEK P. Stochastic model shows how cochlear implants process azimuth in real auditory space. Chinese J. Physiol., 53(6), 439-446, 2010.
    DOI: https://doi.org/10.4077/cjp.2010.amm029
    Note: Open access no. 10. IF no. 11

  11. KOSTAL L., MARSALEK P. Neuronal jitter: can we measure the spike timing dispersion differently? Chinese J. Physiol., 53(6), 454-464, 2010.
    DOI: https://doi.org/10.4077/cjp.2010.amm031
    Note: Open access no. 9. IF no. 10.

  12. STROFFEK J., KURISCAK E., MARSALEK P., Highway toll enforcement, Real time classification of motor vehicles, IEEE Veh. Technol. Mag., 5(4), 56-65, 2010.
    Notes: As of 2018, this paper does not have permanent DOI open access anymore, or the DOI link is not correctly printed in the paper (?). An author pdf file is available via permanent link, or on request. Permanent link last visited OK in 2023(+).
    DOI: https://doi.org/10.1109/MVT.2010.939109 See also the permanent link of the IEEE collection,
    PDF: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=5641642
    Note: IF no. 11.

  13. MARSALEK P., Simulation in neuroscience, with an example of sound localization. In Artificial Intelligence and cognitive science. Volume I. Kvasnicka V., Pospichal J., Kozak S., Navrat P., Paroulek P. (eds.); [In Czech language/ Title: Simulace v neurovědách, příklad modelu prostorového slyšení] STU, Bratislava, Slovakia, pages 281-298, 2009.

  14. KOSTAL L., MARSALEK P., Neuronal jitter: can we measure the spike timing dispersion differently? Conference abstract, BMC Neuroscience, 10 (1), P103, 2009.

  15. HOZMAN J., CHALOUPKA J., MARSALEK P., Laboratory exercises in biomedical and clinical techniques, vol. 3 - Physiological simulators and patients' safety. [In Czech language.] (Equal contribution by all three co-authors, by Marsalek 33%, several chapters, circa 33 of total 100 pages.) Czech Technical University, CTU Press, Prague, 2008.

  16. MARSALEK P., KOFRANEK J. Sound localization and the underlying neural code. In the BioComp Conference Proceedings (Extended abstract), Vietri sur Mare, Italy, 2 pages, 2008.

  17. MARSALEK P., DRAPAL M., Mechanisms of Coincidence Detection in the Auditory Brainstem: Examples. In a book: Mathematical Modeling of Biological Systems, Volume II. A. Deutsch, R. Bravo de la Parra, R. de Boer, O. Diekmann, P. Jagers, E. Kisdi, M. Kretzschmar, P. Lansky, H. Metz (eds). Birkhaeuser, Boston, 255-264, 2008.
    DOI: https://doi.org/10.1007/978-0-8176-4556-4_22
    Note: refereed chapter in a book.

  18. MARSALEK P., ZAPOTOCKY M., Model of the regulation of Drosophila flight by mechanosensory feedback, Conference abstract, BMC Neuroscience, 8 (2), P49, 2007.

  19. STROFFEK J., KURISCAK E., MARSALEK P., Pattern storage in a sparsely coded neural network with cyclic activation, Biosystems, 89, 257-263, 2007.
    DOI: https://doi.org/10.1016/j.biosystems.2006.04.023
    Note: IF no. (10).

  20. HOZMAN J., ZANCHI V., CERNY R., MARSALEK P., SZABO Z., Precise advanced head posture measurement. In Proceedings of the 3rd WSEAS International Conference on Remote Sensing, Venice, Italy, Vol. 6, pages 18-26. WSEAS, November 2007.
    DOI: https://doi.org/10.1.1/463.3273
    Note: this is a refereed conference proceedings paper, accessible not by this DOI, but via the Google Scholar/ Cite-Seer link, item no. 20.

  21. MARSALEK P. Neuronal mechanisms of sound localization. Habilitation thesis, Circa 70 pages. Charles University in Prague, First Medical Faculty, Prague, 2005.
    Full text web link Marsalek-Habilitation-Thesis-2005.pdf
    Note: written in Czech language, item no. 19.

  22. MARSALEK P., LANSKY P. Proposed mechanisms for coincidence detection in the auditory brainstem. Biol. Cybern., 92(6), 445-51, 2005.
    DOI: https://doi.org/10.1007/s00422-005-0571-1
    Notes: impacted (9), listed as 18.

  23. MARSALEK P., KOFRANEK J. Spike encoding mechanisms in sound localization pathway. Biosystems, 79, 191-198, 2005.
    DOI: https://doi.org/10.1016/j.biosystems.2004.09.022
    Note: open access no. [8], IF no. (8), item 17.

  24. VOKURKA M. et al. Pathological physiology for non-medical curriculum. Two chapters: Control theory, and Fifty selected equations with typical values (Appendix). Karolinum Press, Prague, (First edition) 2005.
    Notes: In the Czech language. Contribution by Marsalek 20%, circa 20 of total 100 pages. Item no. 16.

  25. KOFRANEK J., MARUNA P., ANDRLIK M., STODULKA P., KRIPNER T., WÜNSCH Z., MARSALEK P., SMUTEK D., SVACINA S. The design and development of interactive multimedia in educational software with simulation games. In Proceedings of the Seventh IASTED International Conference on Computer Graphics And Imaging, Kauai, Hawaii, USA, pages 164-170. IASTED, 2004.
    Note: this is a refereed conference proceedings text.

  26. KURISCAK E., MARSALEK P. Neural microcircuits with adapting synapses. Prague Medical Report, 105, 369-380, 2004.
    PDF link: PDF: https://pmr.cuni.cz/Data/files/PragueMedicalReport/PMR 2004-04 Kuriščák.pdf
    Notes: open access item 7, refereed, listed as item no. 14.

  27. MARSALEK P., KOFRANEK J. Sound localization at high frequencies and across the frequency range. Neurocomputing, 58, 999-1006, 2004.
    DOI: https://doi.org/10.1016/j.neucom.2004.01.158
    Note: IF no. (7), item no. 13.

  1. HRUBY T., MARSALEK P. Event-related potentials - the P3 wave. Acta Neurobiol. Exp. (Wars.), 63(1), 55-63, 2003.
    PDF: https://www.ane.pl/archive.php?vol=63&no=1&id=6308.
    Notes: Open access item [6], IF item (6), item no. 12.

  2. MARSALEK P. Neural code for sound localization at low frequencies. Neurocomputing, 38, 1443-1452, 2001.
    DOI: https://doi.org/10.1016/S0925-2312(01)00524-0
    Note: item no. 11, IF no. (5).

  3. MARSALEK P., KUBENA A. A. Phase space analysis of the 2D nonlinear system. In Neuronal Coding, 4th International Workshop. University of Plymouth, Plymouth, UK, 123-126, 2001.
    Notes: this is: Extended abstract of 4 pages with equations, in an open access conference proceedings. Item no. 10.

  4. MARSALEK P., BRANKACK J., NIEBUR E. Attentive selection based on synchronized spike trains. Society for Neuroscience Annual Meeting. vol. 26, p. 951, 2000.
    This is a conference abstract. Item no. 9.

  5. MARSALEK P. Coincidence detection in the Hodgkin-Huxley equations. Biosystems, 58, 83-91, 2000.
    DOI: https://doi.org/10.1016/s0303-2647(00)00110-6
    Notes: Open access, (4)th impacted, item no. 8.

  6. NECAS E. et al. General pathological physiology. Chapter: Physical causes of diseases. Karolinum Press, Prague 2000.
    Notes: In Czech language. Contribution by Marsalek circa 20%, 24 of total 120 pages. Item no. 7.

  7. MARSALEK P. Biophysical models of neurons. PhD thesis. 62 pages including the three refereed papers, here (below) items 2, 3 and 4. Faculty of Mathematics and Physics, Charles University in Prague, 1999.
    Abstract web link: https://vufind.techlib.cz/Record/000003605
    Full text web link Marsalek-PhD-Thesis-1999.pdf
    Note: this PhD thesis was submitted and defended in 1999.

  8. NECAS E., PSOTTOVA J., SULC K., MARSALEK P., VOKURKA M. et al. Test questions in pathological physiology. Triton, Prague, 1999.
    Notes: this booklet is written in the Czech language. Contribution by Marsalek is circa 12.5%, or 10 of 80 pages.

  9. MARSALEK P., SANTAMARIA F. Investigating spike backpropagation induced Ca2+ influx in models of hippocampal and cortical pyramidal neurons. Biosystems, 48, 147-156, 1998.
    DOI: https://doi.org/10.1016/S0303-2647(98)00060-4
    Notes: this paper is a 4th open access, (3)rd impacted.

  10. MARSALEK P., KOCH C., MAUNSELL J. On the relationship between synaptic input and spike output jitter in individual neurons. Proc. Natl. Acad. Sci. USA, 94, 735-740, 1997.
    DOI: https://doi.org/10.1073/pnas.94.2.735
    Notes: this paper is the 3rd open access, and (2)nd impacted.

  11. MARSALEK P. A simulation approach to the two-point stochastic model of olfactory neurons. Gen. Physiol. Biophys., 13, 341-356, 1994.
    Web link PDF: http://www.gpb.sav.sk/1994/1994_05_341.pdf
    Note(s): this paper is a 2nd open access, and (1)st impacted.

  12. DRAPAL A., KEPKA T., MARSALEK P. Multiplication groups of quasigroups and loops II. Acta Univ. Carol. Math. et Phys., 35, 9-29, 1994.
    Web link PDF: https://dml.cz/dmlcz/142660
    Note/ s: this a very first paper of mine. It is open access and refereed.